Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL00994.1Predicted protein. (282 aa)    
Predicted Functional Partners:
EFL03179.1
Regulatory protein.
  
   0.760
EFK99353.1
Anti-sigma factor.
  
   0.743
EFL02737.1
Regulatory protein.
  
   0.733
EFL01517.1
Regulatory protein.
  
   0.723
EFL00995.1
Conserved hypothetical protein.
 
     0.710
EFL00836.1
Regulatory protein.
 
 
 0.680
EFL01541.1
Regulatory protein.
  
   0.657
EFL00167.1
Regulatory protein.
 
   0.640
EFL01975.1
Site-specific recombinase Int.
  
     0.613
EFL02787.1
Integral membrane phosphodiesterase; Truncated CDS; unextendable partial coding region.
  
 
 0.603
Your Current Organism:
Streptomyces sp. SPB78
NCBI taxonomy Id: 591157
Other names: S. sp. SPB78
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