STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL01008.1CRISPR-associated protein; Overlaps another CDS with the same product name. (236 aa)    
Predicted Functional Partners:
EFL01009.1
CRISPR-associated protein; Overlaps another CDS with the same product name.
 
 
 0.999
EFL01010.1
CRISPR-associated protein; Overlaps another CDS with the same product name.
 
 
 0.999
EFL01011.1
CRISPR-associated protein; Overlaps another CDS with the same product name.
 
 
 0.999
EFL01012.1
CRISPR-associated helicase.
 
 
 
 0.999
cas1
CRISPR-associated protein cas1; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette.
 
  
 0.986
EFL01006.1
CRISPR-associated protein cas2.
 
  
 0.981
EFL01005.1
Conserved hypothetical protein; Truncated CDS; unextendable partial coding region.
  
     0.728
EFL00787.1
Conserved hypothetical protein; Truncated CDS; unextendable partial coding region.
  
     0.670
EFL03214.1
Conserved hypothetical protein.
  
     0.586
EFL03213.1
Conserved hypothetical protein.
  
     0.490
Your Current Organism:
Streptomyces sp. SPB78
NCBI taxonomy Id: 591157
Other names: S. sp. SPB78
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.