Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL01021.1Conserved hypothetical protein. (171 aa)    
Predicted Functional Partners:
EFL01020.1
Secreted protein.
 
  
 0.957
EFL01019.1
Large glycine/alanine rich protein; Truncated CDS; unextendable partial coding region.
 
     0.885
EFL00988.1
phiRv2 prophage protein.
  
     0.709
EFL00870.1
Conserved hypothetical protein.
  
     0.575
EFK98934.1
Regulatory protein.
  
     0.474
EFL01398.1
Conserved hypothetical protein.
  
     0.474
EFK98413.1
Secreted protein.
  
  
 0.463
EFL01327.1
Conserved hypothetical protein.
  
  
 0.463
EFL04321.1
Conserved hypothetical protein.
  
     0.460
EFL01652.1
Conserved hypothetical protein.
  
     0.419
Your Current Organism:
Streptomyces sp. SPB78
NCBI taxonomy Id: 591157
Other names: S. sp. SPB78
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