Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL01041.1Monooxygenase. (477 aa)    
Predicted Functional Partners:
EFK98234.1
NmrA family protein.
  
 
  0.660
EFL02988.1
Monooxygenase.
  
  
 
0.642
EFL01677.1
NmrA family protein.
  
 
  0.577
EFL02144.1
Ferredoxin.
 
  
 0.557
EFL01042.1
Predicted protein.
       0.549
EFL01901.1
Secreted protein.
   
  0.548
EFL01902.1
Secreted esterase.
   
  0.548
EFL03032.1
Serine protease.
   
  0.548
EFL04095.1
poly(L-lactic acid) depolymerase.
   
  0.548
EFK99495.1
Conserved hypothetical protein.
    
  0.532
Your Current Organism:
Streptomyces sp. SPB78
NCBI taxonomy Id: 591157
Other names: S. sp. SPB78
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