STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL01160.1Nodulation ABC transporter NodI. (303 aa)    
Predicted Functional Partners:
EFL01161.1
Integral membrane protein.
 
  0.987
EFL01159.1
Integral membrane protein.
 
  0.986
EFL01162.1
D-methionine ABC transporter, ATP-binding protein.
 
    
0.918
kptA
Phosphotransferase; Removes the 2'-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP-ribose 1''-2''- cyclic phosphate (APPR>P). May function as an ADP-ribosylase.
       0.681
EFL01167.1
Luciferase.
       0.611
EFL02252.1
2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT.
 
     
0.610
EFL01168.1
HAD-superfamily hydrolase.
   
   0.600
EFL02826.1
Conserved hypothetical protein.
  
     0.587
EFL01163.1
Short chain dehydrogenase.
       0.567
EFL01157.1
Predicted protein.
       0.556
Your Current Organism:
Streptomyces sp. SPB78
NCBI taxonomy Id: 591157
Other names: S. sp. SPB78
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.