Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL01161.1Integral membrane protein. (295 aa)    
Predicted Functional Partners:
EFL01160.1
Nodulation ABC transporter NodI.
 
   0.981
EFL01162.1
D-methionine ABC transporter, ATP-binding protein.
 
   0.981
EFL01159.1
Integral membrane protein.
 
     0.968
EFL02481.1
Conserved hypothetical protein.
  
     0.665
kptA
Phosphotransferase; Removes the 2'-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP-ribose 1''-2''- cyclic phosphate (APPR>P). May function as an ADP-ribosylase.
       0.662
EFL02826.1
Conserved hypothetical protein.
  
     0.648
EFL01167.1
Luciferase.
       0.588
EFL02852.1
Conserved hypothetical protein.
  
     0.572
EFL01163.1
Short chain dehydrogenase.
       0.561
EFL00906.1
Conserved hypothetical protein.
  
     0.542
Your Current Organism:
Streptomyces sp. SPB78
NCBI taxonomy Id: 591157
Other names: S. sp. SPB78
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