Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EFL01162.1D-methionine ABC transporter, ATP-binding protein. (344 aa)    
Predicted Functional Partners:
EFL01161.1
Integral membrane protein.
 
   0.981
EFL01159.1
Integral membrane protein.
 
  0.980
EFL01160.1
Nodulation ABC transporter NodI.
 
    
0.912
EFK98798.1
Glycine betaine ABC transport system permease.
     
  0.831
EFK98799.1
Choline ABC transporter, ATP-binding protein.
 
   
 
0.664
kptA
Phosphotransferase; Removes the 2'-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP-ribose 1''-2''- cyclic phosphate (APPR>P). May function as an ADP-ribosylase.
       0.662
EFL00509.1
ABC-type cobalt transport system.
  
  
  0.632
EFK99064.1
Type I secretion system ATPase.
  
 
  0.629
EFL00507.1
Cell division ATP-binding protein FtsE; Part of an ABC transporter complex. Responsible for energy coupling to the transport system.
  
  
 
0.618
EFL04047.1
ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC.
  
 
  0.617
Your Current Organism:
Streptomyces sp. SPB78
NCBI taxonomy Id: 591157
Other names: S. sp. SPB78
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