Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL01202.1Integral membrane protein. (501 aa)    
Predicted Functional Partners:
EFL01681.1
Integral membrane protein.
    
  0.811
EFL01628.1
Conserved hypothetical protein.
  
     0.624
EFL02265.1
Conserved hypothetical protein.
  
     0.621
EFL01204.1
ParR family transcriptional regulator.
       0.619
EFL01205.1
Inositol 1-phosphate synthase.
       0.607
EFL01206.1
Conserved hypothetical protein.
       0.590
EFL02661.1
Secreted protein.
  
     0.573
EFL00131.1
Lipoprotein.
  
     0.565
EFL02773.1
Methionine synthase.
  
     0.561
EFL01499.1
Conserved hypothetical protein.
  
     0.557
Your Current Organism:
Streptomyces sp. SPB78
NCBI taxonomy Id: 591157
Other names: S. sp. SPB78
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