STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL01202.1Integral membrane protein. (501 aa)    
Predicted Functional Partners:
EFL01204.1
ParR family transcriptional regulator.
       0.640
EFL01205.1
Inositol 1-phosphate synthase.
       0.629
EFL01628.1
Conserved hypothetical protein.
  
     0.624
EFL02265.1
Conserved hypothetical protein.
  
     0.621
EFL01206.1
Conserved hypothetical protein.
       0.613
EFL02661.1
Secreted protein.
  
     0.573
EFL00131.1
Lipoprotein.
  
     0.565
EFL02773.1
Methionine synthase.
  
     0.561
EFL01499.1
Conserved hypothetical protein.
  
     0.557
EFK99187.1
Conserved hypothetical protein.
  
     0.548
Your Current Organism:
Streptomyces sp. SPB78
NCBI taxonomy Id: 591157
Other names: S. sp. SPB78
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.