Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EFL01268.1Serine/threonine protein kinase. (549 aa)    
Predicted Functional Partners:
EFL00877.1
Magnesium or manganese-dependent protein phosphatase.
 
 
 0.970
EFL01251.1
Magnesium or manganese-dependent protein phosphatase.
 
 
 0.961
EFK98577.1
FHA domain-containing protein.
 
 
 
 0.891
EFK98985.1
ABC transporter ATP-binding protein.
  
 0.868
EFL02965.1
Two-component system sensor kinase.
   
 0.859
EFL01252.1
Secreted protein.
 
 
 
 0.845
EFL01253.1
Forkhead-associated protein.
 
 
 
 0.842
EFL02616.1
Conserved hypothetical protein.
  
 
 0.838
EFL03367.1
Conserved hypothetical protein.
  
 
 0.838
EFK99647.1
Conserved hypothetical protein.
   
 
 0.807
Your Current Organism:
Streptomyces sp. SPB78
NCBI taxonomy Id: 591157
Other names: S. sp. SPB78
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