Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EFL01278.1Transcriptional regulator. (210 aa)    
Predicted Functional Partners:
EFL03814.1
Alkylhydroperoxidase; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.
 
     0.590
EFL01279.1
Formylmethionine deformylase.
       0.576
EFL01277.1
2-hydroxycyclohexanecarboxyl-CoA dehydrogenase.
 
     0.562
EFL00864.1
ECF subfamily RNA polymerase sigma factor; Unextendable partial coding region; Belongs to the sigma-70 factor family.
  
     0.486
EFL00386.1
RNA polymerase ECF-subfamily sigma factor; Belongs to the sigma-70 factor family.
  
     0.447
EFK98635.1
ECF family RNA polymerase sigma factor; Truncated CDS; Belongs to the sigma-70 factor family.
  
     0.427
Your Current Organism:
Streptomyces sp. SPB78
NCBI taxonomy Id: 591157
Other names: S. sp. SPB78
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