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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL01282.1Predicted protein. (76 aa)    
Predicted Functional Partners:
EFK99667.1
Conserved hypothetical protein.
  
     0.648
EFL01280.1
Helix-turn-helix domain-containing protein.
 
     0.626
EFL01308.1
Conserved hypothetical protein.
  
     0.624
EFL00310.1
Conserved hypothetical protein.
  
     0.587
EFL01281.1
Regulatory protein.
      
0.574
EFK98033.1
Transposase (IS4 family).
  
     0.558
EFL00050.1
Secreted protein.
  
     0.511
EFL01943.1
Conserved hypothetical protein.
  
     0.496
EFL01823.1
Conserved hypothetical protein.
  
     0.486
EFL00052.1
Conserved hypothetical protein.
  
     0.477
Your Current Organism:
Streptomyces sp. SPB78
NCBI taxonomy Id: 591157
Other names: S. sp. SPB78
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.