Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL01299.1Conserved hypothetical protein. (274 aa)    
Predicted Functional Partners:
EFL00655.1
Conserved hypothetical protein.
  
     0.733
EFK99829.1
Conserved hypothetical protein.
  
     0.719
EFK99024.1
Conserved hypothetical protein.
  
     0.674
EFL01298.1
Conserved hypothetical protein.
       0.615
EFL00335.1
Conserved hypothetical protein.
  
     0.606
EFL00937.1
Conserved hypothetical protein.
  
     0.578
EFL02759.1
Conserved hypothetical protein.
  
     0.578
EFK98676.1
Secreted protein.
  
     0.575
EFK99068.1
Conserved hypothetical protein.
  
     0.574
EFK99832.1
Conserved hypothetical protein.
  
     0.572
Your Current Organism:
Streptomyces sp. SPB78
NCBI taxonomy Id: 591157
Other names: S. sp. SPB78
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