Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL01308.1Conserved hypothetical protein. (192 aa)    
Predicted Functional Partners:
EFL00052.1
Conserved hypothetical protein.
  
     0.703
EFL00050.1
Secreted protein.
  
     0.684
EFL02463.1
Conserved hypothetical protein.
  
     0.633
EFL01282.1
Predicted protein.
  
     0.624
EFL00051.1
Conserved hypothetical protein.
  
     0.599
EFL02481.1
Conserved hypothetical protein.
  
     0.593
EFL02826.1
Conserved hypothetical protein.
  
     0.567
EFK97954.1
Conserved hypothetical protein.
  
     0.521
EFK97955.1
Conserved hypothetical protein.
  
     0.514
EFL01032.1
Conserved hypothetical protein.
  
     0.494
Your Current Organism:
Streptomyces sp. SPB78
NCBI taxonomy Id: 591157
Other names: S. sp. SPB78
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