Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL01327.1Conserved hypothetical protein. (376 aa)    
Predicted Functional Partners:
EFL01328.1
Conserved hypothetical protein.
       0.719
EFL02267.1
Mov34/MPN/PAD-1 family protein.
    
  0.677
dnaK
Chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
     
  0.661
EFK98634.1
Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
     
  0.569
EFL03261.1
Diaminohydroxyphosphoribosylaminopyrimidine reductase.
     
  0.569
EFK99350.1
Predicted protein.
     
  0.565
EFL02840.1
Heat shock protein.
     
  0.565
EFL04049.1
Lipoprotein.
  
     0.562
EFK98977.1
Integral membrane protein.
  
  
 0.558
EFK98623.1
Conserved hypothetical protein.
     
  0.542
Your Current Organism:
Streptomyces sp. SPB78
NCBI taxonomy Id: 591157
Other names: S. sp. SPB78
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