Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL01340.1Acyltransferase. (383 aa)    
Predicted Functional Partners:
EFL01341.1
Conserved hypothetical protein.
 
     0.659
EFL01928.1
Conserved hypothetical protein.
  
     0.628
EFL02489.1
Conserved hypothetical protein.
  
     0.578
EFK98720.1
Conserved hypothetical protein.
  
     0.575
EFL03657.1
Transferase.
 
     0.573
EFL04136.1
Conserved hypothetical protein.
  
     0.558
EFL02177.1
Glycosyltransferase.
 
    0.538
EFL03658.1
Glycosyltransferase.
 
    0.530
EFL03654.1
Integral membrane transferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
  
     0.520
EFL01212.1
Conserved hypothetical protein.
  
     0.499
Your Current Organism:
Streptomyces sp. SPB78
NCBI taxonomy Id: 591157
Other names: S. sp. SPB78
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