STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL01342.1Conserved hypothetical protein. (185 aa)    
Predicted Functional Partners:
EFL00689.1
Conserved hypothetical protein.
  
     0.752
EFK99429.1
Conserved hypothetical protein.
  
     0.676
EFL01390.1
Conserved hypothetical protein.
  
     0.649
EFL01695.1
Conserved hypothetical protein.
  
     0.636
EFL00990.1
Conserved hypothetical protein.
  
     0.634
EFL02384.1
Conserved hypothetical protein.
  
     0.581
EFL02671.1
Conserved hypothetical protein.
  
     0.562
EFL00992.1
Relaxase/mobilization nuclease.
  
     0.561
EFL00958.1
Relaxase/mobilization nuclease.
  
     0.558
EFL02461.1
Transcriptional regulator.
  
     0.555
Your Current Organism:
Streptomyces sp. SPB78
NCBI taxonomy Id: 591157
Other names: S. sp. SPB78
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.