STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL01354.1Lipoprotein. (253 aa)    
Predicted Functional Partners:
EFL01351.1
Sigma-70 region 2 domain-containing protein; Belongs to the sigma-70 factor family. ECF subfamily.
       0.556
EFL01352.1
Tyrosine protein kinase:Serine/threonine protein kinase.
       0.556
EFL01353.1
Tyrosine protein kinase:Serine/threonine protein kinase.
       0.522
EFK98766.1
Conserved hypothetical protein.
  
     0.469
EFL03318.1
Aminoglycoside phosphotransferase; Truncated CDS; unextendable partial coding region.
  
     0.469
EFK98690.1
Integral membrane protein.
  
     0.457
EFL00029.1
Transcriptional regulator.
  
     0.444
EFL00122.1
marR-family transcriptional regulator.
  
     0.432
EFL01192.1
Integral membrane protein; Truncated CDS.
  
     0.423
EFL01875.1
Conserved hypothetical protein.
 
     0.408
Your Current Organism:
Streptomyces sp. SPB78
NCBI taxonomy Id: 591157
Other names: S. sp. SPB78
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.