Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL01357.1Transposase IS4 family protein. (162 aa)    
Predicted Functional Partners:
EFL01358.1
Transposase IS4 family protein.
 
     0.843
EFL03543.1
Transposase (IS4 family).
 
     0.739
EFK97997.1
Transposase.
 
     0.734
EFK98130.1
Transposase (IS4 family).
 
     0.734
EFK99794.1
Transposase (IS4 family).
 
     0.734
EFK99841.1
Transposase (IS4 family).
 
     0.734
EFK99843.1
Transposase (IS4 family).
 
     0.734
EFL00238.1
Transposase (IS4 family).
 
     0.734
EFL00998.1
Transposase (IS4 family).
 
     0.734
EFL01004.1
Transposase (IS4 family).
 
     0.734
Your Current Organism:
Streptomyces sp. SPB78
NCBI taxonomy Id: 591157
Other names: S. sp. SPB78
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