Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL01380.1Predicted protein. (93 aa)    
Predicted Functional Partners:
EFK99589.1
DNA primase.
 
 0.971
EFK97974.1
Transposase.
  
 0.961
EFL02517.1
ATP-dependent DNA helicase PcrA.
  
 0.919
dnaA
Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family.
   
 0.916
EFL01375.1
ATP-binding protein.
  
 0.901
EFL01643.1
ATP-binding protein.
  
 0.901
EFL01977.1
ATP-binding protein.
  
 0.901
EFL01639.1
DNA polymerase III subunit delta'.
 
 0.896
EFK98658.1
Primosome assembly protein; Truncated CDS; unextendable partial coding region.
   
 0.893
EFK99722.1
DNA polymerase III, delta subunit.
 
 
 0.884
Your Current Organism:
Streptomyces sp. SPB78
NCBI taxonomy Id: 591157
Other names: S. sp. SPB78
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