Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL01408.1Integral membrane protein. (295 aa)    
Predicted Functional Partners:
EFK98798.1
Glycine betaine ABC transport system permease.
     
  0.852
EFL00825.1
ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
    
  0.823
EFK99630.1
Metal transport ABC transporter.
     
  0.818
EFL00507.1
Cell division ATP-binding protein FtsE; Part of an ABC transporter complex. Responsible for energy coupling to the transport system.
     
  0.818
EFL03888.1
Maltose-binding protein.
     
  0.818
EFL00513.1
Conserved hypothetical protein.
     
 0.777
EFK99444.1
Integral membrane protein.
     
  0.760
EFL00508.1
Cobalt ABC transporter, permease CbiQ.
     
  0.760
EFK99629.1
Phosphonate ABC transporter, ATP-binding protein.
     
 0.749
EFL01450.1
Molybdate ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
     
  0.733
Your Current Organism:
Streptomyces sp. SPB78
NCBI taxonomy Id: 591157
Other names: S. sp. SPB78
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