Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL01415.1ABC transporter membrane protein. (263 aa)    
Predicted Functional Partners:
EFL01416.1
Nodulation ABC transporter NodI.
 
 
 0.989
EFL02728.1
Integral membrane protein.
  
  
 
0.882
EFL02449.1
ABC transporter integral membrane protein.
  
  
  0.875
EFK99380.1
ABC transporter transmembrane component.
  
  
  0.873
EFL02430.1
Lipoprotein.
  
  
  0.870
EFL03301.1
Extracellular solute-binding protein.
  
  
  0.867
EFK99445.1
D-methionine ABC transporter, ATP-binding protein; Unextendable partial coding region.
   
 
  0.859
EFL00825.1
ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
     
 0.853
EFL04082.1
ABC-transporter integral membrane protein.
    
  0.853
EFL04083.1
ABC-transporter integral membrane protein.
    
  0.853
Your Current Organism:
Streptomyces sp. SPB78
NCBI taxonomy Id: 591157
Other names: S. sp. SPB78
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