close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL01416.1Nodulation ABC transporter NodI. (358 aa)    
Predicted Functional Partners:
EFL01415.1
ABC transporter membrane protein.
 
  
 0.989
EFK99085.1
ABC transporter permease.
 
    0.653
EFK99380.1
ABC transporter transmembrane component.
 
 0.627
EFL02728.1
Integral membrane protein.
  
    0.600
EFL01413.1
Two-component system sensor kinase.
 
  
 0.596
EFL00120.1
Integral membrane transporter.
 
 0.579
EFL02450.1
Two-component system sensor kinase.
 
  
 0.575
EFK99895.1
ABC transporter ATP-binding protein.
   
  0.552
EFL01159.1
Integral membrane protein.
   
  0.552
EFL01927.1
ABC transporter membrane protein.
   
  0.552
Your Current Organism:
Streptomyces sp. SPB78
NCBI taxonomy Id: 591157
Other names: S. sp. SPB78
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.