Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL01421.1Major facilitator superfamily transporter permease. (352 aa)    
Predicted Functional Partners:
EFL02056.1
Multidrug resistance transporter.
  
     0.774
EFK99696.1
Transmembrane transporter.
  
     0.773
EFL03282.1
Transmembrane efflux protein.
  
     0.773
EFK98203.1
Major facilitator transporter.
  
     0.772
EFK99621.1
Transmembrane efflux protein.
  
     0.772
EFL01446.1
Integral membrane transporter; Truncated CDS.
  
     0.770
EFK97980.1
Major facilitator transporter.
  
     0.751
EFK99434.1
Integral membrane efflux protein.
 
   
 0.741
EFL01878.1
Major facilitator superfamily transporter multidrug resistance protein.
  
     0.723
EFL02226.1
Multidrug resistance efflux protein.
  
     0.653
Your Current Organism:
Streptomyces sp. SPB78
NCBI taxonomy Id: 591157
Other names: S. sp. SPB78
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