Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL01423.1Kanamycin acetyltransferase. (165 aa)    
Predicted Functional Partners:
EFL01424.1
Conserved hypothetical protein.
       0.634
EFK99995.1
PadR-family transcriptional regulator.
  
     0.614
EFL02705.1
Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
    
 0.606
EFK99171.1
Glutamate synthase(NADPH) large subunit.
   
 
 0.572
EFL00936.1
Spermidine synthase.
     
  0.569
EFL03151.1
Acetyltransferase.
   
 
  0.560
EFK99950.1
Formimidoylglutamase; Belongs to the arginase family.
     
  0.542
EFL01956.1
Oxidoreductase.
     
  0.531
EFL03670.1
Putrescine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
     
  0.528
EFK99356.1
Conserved hypothetical protein.
  
     0.518
Your Current Organism:
Streptomyces sp. SPB78
NCBI taxonomy Id: 591157
Other names: S. sp. SPB78
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