STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL01425.1Regulator protein. (424 aa)    
Predicted Functional Partners:
EFL01426.1
Hydrolase.
 
     0.816
EFL01457.1
Transcriptional regulator.
 
    0.654
EFK98405.1
Kinase/transcriptional regulator.
 
    0.541
EFL01941.1
AraC-family transcriptional regulator; Truncated CDS.
  
    0.483
EFL02760.1
Conserved hypothetical protein.
  
     0.476
EFL03374.1
Regulatory protein.
  
     0.442
EFL02046.1
Conserved hypothetical protein.
  
     0.441
EFK99174.1
ADP-ribosylation/Crystallin J1.
  
     0.424
EFL04321.1
Conserved hypothetical protein.
  
     0.419
EFK99546.1
Acetyltransferase; Unextendable partial coding region.
  
     0.409
Your Current Organism:
Streptomyces sp. SPB78
NCBI taxonomy Id: 591157
Other names: S. sp. SPB78
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.