Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL01431.1Conserved hypothetical protein. (276 aa)    
Predicted Functional Partners:
EFL01430.1
Valine dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
       0.739
EFL00631.1
DNA-binding protein.
  
     0.708
EFK99401.1
Conserved hypothetical protein.
  
     0.699
EFL02855.1
Conserved hypothetical protein.
  
     0.672
EFK99126.1
DNA-binding protein.
  
     0.663
EFK99338.1
Regulatory protein.
  
     0.656
EFL02258.1
Regulator protein.
  
     0.648
EFL01429.1
Conserved hypothetical protein.
       0.643
EFL01705.1
DNA-binding protein.
  
     0.640
EFL01518.1
DNA-binding protein.
  
     0.634
Your Current Organism:
Streptomyces sp. SPB78
NCBI taxonomy Id: 591157
Other names: S. sp. SPB78
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