Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL01436.1Integral membrane protein. (530 aa)    
Predicted Functional Partners:
EFL01437.1
Conserved hypothetical protein.
       0.799
EFL03654.1
Integral membrane transferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
  
     0.690
EFL01212.1
Conserved hypothetical protein.
  
     0.602
EFL02485.1
Conserved hypothetical protein.
  
     0.551
EFL01975.1
Site-specific recombinase Int.
  
     0.546
EFL03065.1
Conserved hypothetical protein.
  
     0.534
EFL04136.1
Conserved hypothetical protein.
  
     0.530
EFK98570.1
Conserved hypothetical protein.
  
     0.524
EFL01633.1
Anti-sigma factor.
  
     0.484
EFK99520.1
Lipoprotein.
  
     0.480
Your Current Organism:
Streptomyces sp. SPB78
NCBI taxonomy Id: 591157
Other names: S. sp. SPB78
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