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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL01436.1Integral membrane protein. (530 aa)    
Predicted Functional Partners:
EFL01437.1
Conserved hypothetical protein.
       0.810
EFL03654.1
Integral membrane transferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
  
     0.690
EFL01212.1
Conserved hypothetical protein.
  
     0.602
EFL02485.1
Conserved hypothetical protein.
  
     0.551
EFL01975.1
Site-specific recombinase Int.
  
     0.546
EFL03065.1
Conserved hypothetical protein.
  
     0.534
EFL04136.1
Conserved hypothetical protein.
  
     0.530
EFK98570.1
Conserved hypothetical protein.
  
     0.524
EFL00836.1
Regulatory protein.
  
  
  0.486
EFL01633.1
Anti-sigma factor.
  
     0.484
Your Current Organism:
Streptomyces sp. SPB78
NCBI taxonomy Id: 591157
Other names: S. sp. SPB78
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.