STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL01575.1Transcriptional regulator. (402 aa)    
Predicted Functional Partners:
EFL01703.1
Regulatory protein.
  
     0.667
EFK99125.1
Regulatory protein.
  
     0.664
EFL01705.1
DNA-binding protein.
  
     0.660
EFL02072.1
Transcriptional regulator.
  
     0.637
EFL01518.1
DNA-binding protein.
  
     0.633
EFL00874.1
DNA-binding protein.
  
     0.630
EFL00631.1
DNA-binding protein.
  
     0.627
EFK99126.1
DNA-binding protein.
  
     0.621
EFL00416.1
Helix-turn-helix domain-containing protein.
  
     0.615
EFL00902.1
DNA-binding protein.
  
     0.612
Your Current Organism:
Streptomyces sp. SPB78
NCBI taxonomy Id: 591157
Other names: S. sp. SPB78
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.