Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL01585.1Predicted protein. (128 aa)    
Predicted Functional Partners:
EFL01584.1
Predicted protein.
       0.786
EFL01586.1
Conserved hypothetical protein.
       0.654
EFL01590.1
Predicted protein.
       0.572
EFL01587.1
Predicted protein.
       0.571
EFL01588.1
Predicted protein.
       0.571
EFL01589.1
Predicted protein.
       0.571
EFL01591.1
Predicted protein.
       0.570
EFL01592.1
Major structural phage protein.
       0.513
EFL01582.1
Predicted protein.
       0.459
EFL01583.1
Conserved hypothetical protein.
       0.449
Your Current Organism:
Streptomyces sp. SPB78
NCBI taxonomy Id: 591157
Other names: S. sp. SPB78
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