Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL01694.1Conserved hypothetical protein. (156 aa)    
Predicted Functional Partners:
EFL01693.1
abaA.
       0.773
EFL01695.1
Conserved hypothetical protein.
       0.589
EFL01696.1
Conserved hypothetical protein.
       0.551
EFL01691.1
Predicted protein.
       0.441
EFL01692.1
Radical SAM domain-containing protein; Truncated CDS.
       0.441
EFL01697.1
Conserved hypothetical protein.
       0.410
Your Current Organism:
Streptomyces sp. SPB78
NCBI taxonomy Id: 591157
Other names: S. sp. SPB78
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