Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL01751.1Conserved hypothetical protein. (265 aa)    
Predicted Functional Partners:
EFL02570.1
Integral membrane protein.
  
     0.741
EFL02855.1
Conserved hypothetical protein.
  
     0.707
EFL01750.1
Integral membrane protein.
       0.706
EFL01212.1
Conserved hypothetical protein.
  
     0.677
EFK99735.1
Membrane protein.
  
     0.662
EFL02652.1
ATP synthase I.
  
     0.660
EFK99401.1
Conserved hypothetical protein.
  
     0.644
EFL02681.1
Hypothetical protein; Truncated CDS.
  
     0.640
EFK98857.1
Secreted protein.
  
     0.616
EFK99068.1
Conserved hypothetical protein.
 
     0.596
Your Current Organism:
Streptomyces sp. SPB78
NCBI taxonomy Id: 591157
Other names: S. sp. SPB78
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