STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL01804.1Germacradienol/germacrene D synthase. (829 aa)    
Predicted Functional Partners:
EFL03665.1
Polyprenyl diphosphate synthase; Belongs to the FPP/GGPP synthase family.
 
  
 0.957
EFL01805.1
Nucleotide-binding protein.
 
  
 0.945
EFL02552.1
Epi-isozizaene synthase.
  
  
0.927
EFL02553.1
Cytochrome P450 hydroxylase.
     
 0.922
EFK99171.1
Glutamate synthase(NADPH) large subunit.
    
 0.909
EFL01924.1
Heptaprenyl diphosphate synthase component II; Belongs to the FPP/GGPP synthase family.
     
 0.901
EFL02965.1
Two-component system sensor kinase.
 
 
 0.844
guaA
GMP synthase domain-containing protein; Catalyzes the synthesis of GMP from XMP.
    
 0.816
EFL00111.1
Cytochrome P450.
  
  
 0.744
EFL01956.1
Oxidoreductase.
    
  0.734
Your Current Organism:
Streptomyces sp. SPB78
NCBI taxonomy Id: 591157
Other names: S. sp. SPB78
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.