Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
EFL01952.1Integral membrane protein. (385 aa)    
Predicted Functional Partners:
EFL01951.1
Haloacid dehalogenase, type II.
       0.737
EFL01954.1
Transcriptional regulator.
       0.660
EFL01955.1
2-oxoglutarate ferredoxin oxidoreductase subunit beta.
       0.530
EFL01956.1
Oxidoreductase.
       0.530
EFL01958.1
Two-component system response regulator.
       0.530
EFL01953.1
NmrA family protein.
       0.467
EFL02661.1
Secreted protein.
      
 0.464
Your Current Organism:
Streptomyces sp. SPB78
NCBI taxonomy Id: 591157
Other names: S. sp. SPB78
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