STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL01975.1Site-specific recombinase Int. (457 aa)    
Predicted Functional Partners:
EFL01976.1
Xis.
 
   
 0.973
EFL01124.1
Replication initiation protein; Unextendable partial coding region.
 
    0.841
EFL01115.1
Plasmid transfer protein.
 
     0.648
EFL02705.1
Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
    
 0.621
EFL00994.1
Predicted protein.
  
     0.613
EFL01942.1
Conserved hypothetical protein.
  
     0.575
EFL01946.1
Conserved hypothetical protein.
  
     0.563
EFL01119.1
Predicted protein.
       0.556
EFL01436.1
Integral membrane protein.
  
     0.546
EFK98570.1
Conserved hypothetical protein.
  
     0.542
Your Current Organism:
Streptomyces sp. SPB78
NCBI taxonomy Id: 591157
Other names: S. sp. SPB78
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.