Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL01978.1Conserved hypothetical protein. (275 aa)    
Predicted Functional Partners:
EFL01977.1
ATP-binding protein.
    
 0.910
EFL01979.1
Conserved hypothetical protein.
       0.786
EFK98658.1
Primosome assembly protein; Truncated CDS; unextendable partial coding region.
     
  0.696
EFL00988.1
phiRv2 prophage protein.
    
  0.692
EFL01193.1
Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily.
    
  0.653
EFL01380.1
Predicted protein.
    
  0.653
EFL02219.1
Integration host factor, alpha subunit; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions.
     
  0.650
EFL02825.1
DNA-binding protein HU 2; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions.
     
  0.650
EFL01375.1
ATP-binding protein.
    
 0.624
EFL01643.1
ATP-binding protein.
    
 0.624
Your Current Organism:
Streptomyces sp. SPB78
NCBI taxonomy Id: 591157
Other names: S. sp. SPB78
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