STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL01982.1TraB. (692 aa)    
Predicted Functional Partners:
EFL01983.1
Conserved hypothetical protein.
     
 0.838
EFL01984.1
Integral membrane protein.
       0.724
EFL01985.1
Conserved hypothetical protein.
       0.574
EFL01063.1
Conserved hypothetical protein.
  
 
   0.568
EFK99346.1
Conserved hypothetical protein.
  
     0.544
EFL01988.1
Conserved hypothetical protein.
       0.531
EFL01989.1
Conserved hypothetical protein.
       0.529
EFL01115.1
Plasmid transfer protein.
  
     0.524
EFL01976.1
Xis.
 
   
 0.504
ftsQ
Sporulation protein; Essential cell division protein; Belongs to the FtsQ/DivIB family. FtsQ subfamily.
   
 
 0.503
Your Current Organism:
Streptomyces sp. SPB78
NCBI taxonomy Id: 591157
Other names: S. sp. SPB78
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.