Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL01982.1TraB. (692 aa)    
Predicted Functional Partners:
EFL01983.1
Conserved hypothetical protein.
     
 0.807
EFL01984.1
Integral membrane protein.
       0.723
ftsQ
Sporulation protein; Essential cell division protein; Belongs to the FtsQ/DivIB family. FtsQ subfamily.
   
 0.716
ftsZ
Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.
   
 0.613
EFL01985.1
Conserved hypothetical protein.
       0.574
EFL01989.1
Conserved hypothetical protein.
     
 0.562
EFK99346.1
Conserved hypothetical protein.
  
     0.544
EFK99238.1
Cell division protein FtsW; Belongs to the SEDS family.
  
 
  0.539
EFL01988.1
Conserved hypothetical protein.
       0.528
EFK99244.1
Stage V sporulation protein D.
  
 
  0.524
Your Current Organism:
Streptomyces sp. SPB78
NCBI taxonomy Id: 591157
Other names: S. sp. SPB78
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