STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL01991.1Helix-turn-helix domain-containing protein. (255 aa)    
Predicted Functional Partners:
EFL01992.1
NUDIX hydrolase; Belongs to the Nudix hydrolase family.
 
     0.957
EFL01993.1
Metal dependent phosphohydrolase.
  
     0.754
EFL03148.1
NUDIX hydrolase.
  
     0.508
EFL04022.1
NUDIX hydrolase.
  
    0.501
EFL04175.1
ATP/GTP-binding protein.
  
     0.426
EFL01947.1
Conserved hypothetical protein.
  
     0.406
Your Current Organism:
Streptomyces sp. SPB78
NCBI taxonomy Id: 591157
Other names: S. sp. SPB78
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