STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL02093.1acyl-CoA hydrolase. (185 aa)    
Predicted Functional Partners:
EFL02092.1
Transcriptional regulator.
       0.775
EFL03237.1
Fatty oxidation complex, alpha subunit FadB.
  
 0.729
EFL03640.1
Fatty oxidation complex, alpha subunit FadB.
  
 0.729
EFL03762.1
Beta keto-acyl synthase; Truncated CDS; unextendable partial coding region.
  
  
 0.587
EFK99838.1
Thioesterase superfamily protein.
  
 
 0.548
sucC
succinyl-CoA synthetase subunit beta; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit.
     
 0.497
EFL03299.1
Conserved hypothetical protein.
    
  0.479
EFK98639.1
Conserved hypothetical protein.
 
 
 0.477
EFK99328.1
2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase.
 
  
  0.448
EFK98992.1
Enoyl-(acyl carrier protein) reductase.
   
    0.446
Your Current Organism:
Streptomyces sp. SPB78
NCBI taxonomy Id: 591157
Other names: S. sp. SPB78
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.