STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL02152.1Conserved hypothetical protein. (174 aa)    
Predicted Functional Partners:
EFL02153.1
Phosphatase.
 
     0.908
EFL02151.1
Predicted protein.
       0.772
EFL02928.1
prolyl-tRNA synthetase.
  
     0.752
EFL00602.1
Conserved hypothetical protein.
  
     0.700
EFL00283.1
Chorismate mutase.
  
     0.673
EFK99289.1
Glycosyl transferase.
  
     0.651
EFL00144.1
Conserved hypothetical protein.
  
     0.643
EFL02931.1
Conserved hypothetical protein.
  
     0.617
EFL00719.1
Conserved hypothetical protein.
  
     0.568
EFL02157.1
NAD-glutamate dehydrogenase.
       0.556
Your Current Organism:
Streptomyces sp. SPB78
NCBI taxonomy Id: 591157
Other names: S. sp. SPB78
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.