STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL02160.1ABC transporter ATP-binding component. (299 aa)    
Predicted Functional Partners:
EFL02161.1
ABC transporter integral membrane protein.
 
 0.999
EFL03659.1
ABC transporter integral membrane protein.
 
 0.998
EFK99750.1
Glycosyl transferase.
 
 
 0.867
EFL00513.1
Conserved hypothetical protein.
  
  
 0.838
EFL02159.1
CDP-glycerol:polyglycerol phosphate glycero-phosphotransferase.
 
 
 0.822
EFK99752.1
Glycosyltransferase.
 
 
 0.809
EFL02141.1
Predicted protein.
   
    0.805
EFK99751.1
Glycosyltransferase.
 
 
 0.800
EFL02158.1
Transferase.
 
 
 0.727
EFL02164.1
Transferase.
 
 
 0.700
Your Current Organism:
Streptomyces sp. SPB78
NCBI taxonomy Id: 591157
Other names: S. sp. SPB78
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.