STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL02223.1Sugar hydrolase. (448 aa)    
Predicted Functional Partners:
EFL00732.1
PTS system, sucrose-specific IIBC component.
  
  
 0.953
EFL02662.1
Chitinase C.
 
  
 0.819
EFL00211.1
beta-N-acetylglucosaminidase.
  
  
 
0.803
EFK98258.1
Chitinase A; Belongs to the glycosyl hydrolase 18 family.
  
  
 0.780
EFK98590.1
PTS system sugar phosphotransferase component IIA.
  
    0.760
EFK98360.1
Secreted chitinase.
  
  
 0.698
cutC
Copper homeostasis protein; Participates in the control of copper homeostasis. Belongs to the CutC family.
 
     0.678
EFK98320.1
Chitinase II.
  
  
 0.674
EFL02342.1
D-aminoacylase.
 
  
  0.638
EFL02273.1
PTS system, N-acetylglucosamine-specific IIBC component.
  
    0.626
Your Current Organism:
Streptomyces sp. SPB78
NCBI taxonomy Id: 591157
Other names: S. sp. SPB78
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.