Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL02238.1Conserved hypothetical protein; Unextendable partial coding region. (162 aa)    
Predicted Functional Partners:
EFL02050.1
Conserved hypothetical protein.
  
     0.773
EFK99126.1
DNA-binding protein.
 
     0.772
EFL01705.1
DNA-binding protein.
 
     0.768
EFL00464.1
DNA-binding protein.
  
     0.761
EFL00450.1
Helix-turn-helix domain-containing protein.
  
     0.760
EFL01280.1
Helix-turn-helix domain-containing protein.
  
     0.760
EFL00631.1
DNA-binding protein.
  
     0.755
EFL00416.1
Helix-turn-helix domain-containing protein.
  
     0.754
EFL00902.1
DNA-binding protein.
  
     0.754
EFL02072.1
Transcriptional regulator.
  
     0.754
Your Current Organism:
Streptomyces sp. SPB78
NCBI taxonomy Id: 591157
Other names: S. sp. SPB78
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