Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL02255.1Conserved hypothetical protein. (236 aa)    
Predicted Functional Partners:
EFL02256.1
Predicted protein.
       0.773
EFL00967.1
Conserved hypothetical protein.
  
     0.612
EFK98570.1
Conserved hypothetical protein.
  
     0.530
EFK98827.1
Ferredoxin.
  
     0.469
EFL04049.1
Lipoprotein.
  
     0.444
EFL02257.1
Glycolate oxidase, subunit GlcD.
       0.443
EFL00049.1
Integral membrane protein.
  
     0.425
EFL02254.1
Transcription regulator AsnC.
       0.419
EFK99290.1
Integral membrane protein.
  
     0.417
EFK99370.1
Integral membrane protein.
  
     0.409
Your Current Organism:
Streptomyces sp. SPB78
NCBI taxonomy Id: 591157
Other names: S. sp. SPB78
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