STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL02260.1Secreted protease. (789 aa)    
Predicted Functional Partners:
EFL02261.1
Conserved hypothetical protein.
       0.762
EFL02922.1
Acetyltransferase.
  
     0.588
EFL03783.1
Neutral zinc metalloprotease; Extracellular zinc metalloprotease.
  
   
 0.525
EFL02722.1
Metalloendopeptidase; Extracellular zinc metalloprotease.
  
   
 0.513
EFL00528.1
Peptidase M48.
     
 0.424
EFL00508.1
Cobalt ABC transporter, permease CbiQ.
  
     0.415
EFL01463.1
Integral membrane protein.
  
    0.413
EFL02670.1
Anti-sigma factor; Belongs to the anti-sigma-factor antagonist family.
  
     0.413
EFL00482.1
Glyoxalase.
  
    0.412
EFL04241.1
Amidase.
  
     0.400
Your Current Organism:
Streptomyces sp. SPB78
NCBI taxonomy Id: 591157
Other names: S. sp. SPB78
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.