Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL02276.1Conserved hypothetical protein. (304 aa)    
Predicted Functional Partners:
EFL02279.1
Bacterioferritin comigratory protein.
       0.674
EFL03853.1
Conserved hypothetical protein.
  
     0.644
EFL01467.1
Conserved hypothetical protein.
 
 
 
 0.629
EFL02280.1
Membrane protein.
       0.624
EFL02277.1
Conserved hypothetical protein.
       0.580
EFK98837.1
Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
     
  0.562
EFL02281.1
Chaperonin GroS; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter; Belongs to the GroES chaperonin family.
       0.557
EFK99723.1
Conserved hypothetical protein.
  
     0.533
EFL01530.1
mutT.
  
     0.515
EFL02278.1
Osmoprotectant transporter.
       0.511
Your Current Organism:
Streptomyces sp. SPB78
NCBI taxonomy Id: 591157
Other names: S. sp. SPB78
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