Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL02353.1Two-component system response regulator. (249 aa)    
Predicted Functional Partners:
EFL02965.1
Two-component system sensor kinase.
  
 0.978
EFL02352.1
Predicted protein.
 
   0.975
EFK98983.1
Two-component system sensor kinase.
 
  0.853
EFK99317.1
Two-component system sensor kinase.
  
   0.810
EFL00218.1
Two component system sensor kinase.
  
   0.803
EFL00432.1
Two component system sensor kinase.
  
   0.797
EFK98180.1
Two-component system sensor kinase.
  
  0.787
EFL00755.1
Histidine autokinase.
  
   0.782
EFL00486.1
Two-component system response regulator.
  
     0.774
EFL00492.1
Two-component system response regulator.
  
     0.773
Your Current Organism:
Streptomyces sp. SPB78
NCBI taxonomy Id: 591157
Other names: S. sp. SPB78
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