Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL02360.1Secreted protein. (139 aa)    
Predicted Functional Partners:
EFL02351.1
Integral membrane protein.
 
     0.708
EFL02350.1
Integral membrane protein.
 
     0.696
EFL02349.1
Septum site-determining protein.
 
     0.650
EFL01568.1
Secretory protein.
 
     0.539
EFL00116.1
Regulatory protein.
  
     0.538
EFL01625.1
Secretory protein.
 
     0.532
EFL01871.1
Type IV peptidase.
       0.530
EFL02358.1
Methyltransferase type 11.
       0.530
EFL01853.1
P-type DNA transfer ATPase VirB11.
 
     0.475
EFL02348.1
Conserved hypothetical protein.
 
     0.435
Your Current Organism:
Streptomyces sp. SPB78
NCBI taxonomy Id: 591157
Other names: S. sp. SPB78
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