STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL02405.1GntR-family transcriptional regulator. (251 aa)    
Predicted Functional Partners:
EFL02404.1
Threonine synthase; Unextendable partial coding region.
       0.559
EFL02406.1
Conserved hypothetical protein.
       0.511
EFK98115.1
Permease for cytosine/purines uracil thiamine allantoin.
       0.502
EFL03371.1
Iron-sulfur protein.
  
     0.478
EFK98148.1
Transcriptional regulator.
  
     0.464
EFK99942.1
Transcriptional regulator.
  
     0.464
EFL04136.1
Conserved hypothetical protein.
  
     0.461
EFK98486.1
GntR family transcriptional regulator.
  
     0.447
EFL02855.1
Conserved hypothetical protein.
  
     0.444
EFL01212.1
Conserved hypothetical protein.
  
     0.428
Your Current Organism:
Streptomyces sp. SPB78
NCBI taxonomy Id: 591157
Other names: S. sp. SPB78
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.