Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
EFL02405.1GntR-family transcriptional regulator. (251 aa)    
Predicted Functional Partners:
gcvP
Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
     
  0.566
EFL02404.1
Threonine synthase; Unextendable partial coding region.
       0.546
EFL02406.1
Conserved hypothetical protein.
       0.511
EFL03371.1
Iron-sulfur protein.
  
     0.478
EFK98115.1
Permease for cytosine/purines uracil thiamine allantoin.
       0.475
EFK98148.1
Transcriptional regulator.
  
     0.464
EFK99942.1
Transcriptional regulator.
  
     0.464
EFL04136.1
Conserved hypothetical protein.
  
     0.461
EFK98486.1
GntR family transcriptional regulator.
  
     0.447
EFL02855.1
Conserved hypothetical protein.
  
     0.444
Your Current Organism:
Streptomyces sp. SPB78
NCBI taxonomy Id: 591157
Other names: S. sp. SPB78
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