Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL02409.1Regulatory protein. (135 aa)    
Predicted Functional Partners:
EFL02965.1
Two-component system sensor kinase.
  
 
 0.901
EFK98321.1
Conserved hypothetical protein.
  
   0.808
EFL04186.1
Regulatory protein.
 
  
  0.795
EFL00563.1
Conserved hypothetical protein.
  
   0.786
EFL03179.1
Regulatory protein.
  
   0.769
EFL01541.1
Regulatory protein.
  
     0.721
EFL02737.1
Regulatory protein.
  
     0.701
EFL01633.1
Anti-sigma factor.
  
   0.627
EFL00856.1
Magnesium or manganese-dependent protein phosphatase.
  
     0.592
EFL01120.1
Diguanylate cyclase; Unextendable partial coding region.
  
 
  0.556
Your Current Organism:
Streptomyces sp. SPB78
NCBI taxonomy Id: 591157
Other names: S. sp. SPB78
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