Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EFL02412.1Glycoside hydrolase. (504 aa)    
Predicted Functional Partners:
xylA
Xylose isomerase; Belongs to the xylose isomerase family.
    
  0.697
EFL03701.1
Arabinan endo-1,5-alpha-L-arabinosidase A.
 
  
 0.580
EFL00513.1
Conserved hypothetical protein.
  
  
 0.566
EFL03057.1
FAD-dependent oxidoreductase.
     
  0.566
EFL03343.1
Xylitol oxidase.
     
  0.566
EFL03402.1
Beta-galactosidase.
  
  
  0.501
EFL02178.1
Alpha-glucosidase.
  
     0.477
EFL01790.1
Conserved hypothetical protein.
  
     0.441
EFL03752.1
Coagulation factor 5/8 type domain-containing protein.
  
     0.438
EFK99411.1
L-rhamnose catabolism isomerase.
     
  0.436
Your Current Organism:
Streptomyces sp. SPB78
NCBI taxonomy Id: 591157
Other names: S. sp. SPB78
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